Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit alpha | TZ53_RS11430 | Not Available | Positive | 2498051 - 2500006 | 72197.5 |
| endonuclease domain-containing protein | TZ53_RS11435 | Not Available | Positive | 2500097 - 2500483 | 14309.0 |
| ribonucleotide-diphosphate reductase subunit beta | TZ53_RS11440 | Not Available | Positive | 2500490 - 2501545 | 40750.8 |
| glycine zipper 2tm domain-containing protein | TZ53_RS11445 | Not Available | Positive | 2501735 - 2502235 | 18160.3 |
| thermonuclease family protein | TZ53_RS11450 | Not Available | Negative | 2502304 - 2502879 | 20733.7 |
| globin | TZ53_RS11455 | Not Available | Positive | 2502996 - 2503388 | 14022.8 |
| hypothetical protein | TZ53_RS11460 | Not Available | Negative | 2503416 - 2503721 | 11162.2 |
| rida family protein | TZ53_RS11465 | Not Available | Positive | 2503857 - 2504237 | 13562.2 |
| arsc family reductase | TZ53_RS11470 | Not Available | Positive | 2504243 - 2504599 | 13219.9 |
| glycerophosphodiester phosphodiesterase | TZ53_RS11475 | Not Available | Positive | 2504626 - 2505648 | 37192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
