Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase (acetylating) | TZ53_RS23450 | Not Available | Positive | 215261 - 216178 | 31997.6 |
| 4-hydroxy-2-oxovalerate aldolase | TZ53_RS23455 | Not Available | Positive | 216175 - 217215 | 36929.7 |
| catechol 2,3-dioxygenase | TZ53_RS23460 | Not Available | Positive | 217242 - 218174 | 35124.7 |
| transposase | TZ53_RS27675 | Not Available | Negative | 218881 - 219263 | 13549.2 |
| is6-like element is6100 family transposase | TZ53_RS23465 | Not Available | Positive | 219680 - 220444 | 29684.0 |
| fcd domain-containing protein | TZ53_RS23470 | Not Available | Positive | 220547 - 220978 | 16728.8 |
| ferredoxin--nadp reductase | TZ53_RS23475 | Not Available | Negative | 221152 - 222159 | 36383.2 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | TZ53_RS23480 | Not Available | Negative | 222172 - 222813 | 24391.4 |
| aromatic ring-hydroxylating oxygenase subunit alpha | TZ53_RS23485 | Not Available | Negative | 222810 - 224144 | 50150.8 |
| type 1 glutamine amidotransferase | TZ53_RS23490 | Not Available | Negative | 224169 - 224897 | 26384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
