Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nadp(+)) | TZ53_RS11235 | Not Available | Negative | 2466716 - 2468293 | 53877.4 |
| ilvd/edd family dehydratase | TZ53_RS11240 | Not Available | Negative | 2468318 - 2470120 | 64068.8 |
| 2-dehydro-3-deoxygalactonokinase | TZ53_RS11245 | Not Available | Positive | 2470243 - 2471145 | 31693.6 |
| phosphatase pap2 family protein | TZ53_RS27535 | Not Available | Positive | 2471280 - 2471420 | 4712.79 |
| pas domain-containing sensor histidine kinase | TZ53_RS11250 | Not Available | Negative | 2471425 - 2473461 | 74109.9 |
| cox15/ctaa family protein | TZ53_RS11255 | Not Available | Positive | 2473608 - 2474654 | 38012.2 |
| divalent-cation tolerance protein cuta | TZ53_RS11260 | Not Available | Positive | 2474651 - 2474968 | 11382.6 |
| 50s ribosomal protein l13 | TZ53_RS11265 | Not Available | Positive | 2475106 - 2475585 | 17665.7 |
| 30s ribosomal protein s9 | TZ53_RS11270 | Not Available | Positive | 2475585 - 2476112 | 18766.4 |
| m23 family metallopeptidase | TZ53_RS11275 | Not Available | Negative | 2476250 - 2477428 | 41811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
