Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | TZ53_RS11185 | Not Available | Positive | 2457057 - 2457392 | 11881.7 |
| protein translocase subunit secd | TZ53_RS11190 | Not Available | Positive | 2457402 - 2459003 | 56784.4 |
| protein translocase subunit secf | TZ53_RS11195 | Not Available | Positive | 2459019 - 2460005 | 35522.9 |
| mth938/ndufaf3 family protein | TZ53_RS11200 | Not Available | Positive | 2460119 - 2460403 | 10227.5 |
| ppx/gppa phosphatase family protein | TZ53_RS11205 | Not Available | Positive | 2460507 - 2461625 | 39402.6 |
| rlme family rna methyltransferase | TZ53_RS11210 | Not Available | Positive | 2461636 - 2462307 | 24063.2 |
| yifb family mg chelatase-like aaa atpase | TZ53_RS11215 | Not Available | Positive | 2462442 - 2463950 | 52175.3 |
| fadr/gntr family transcriptional regulator | TZ53_RS11220 | Not Available | Negative | 2464024 - 2464779 | 27924.7 |
| gfo/idh/moca family protein | TZ53_RS11225 | Not Available | Negative | 2464798 - 2465721 | 33193.6 |
| arad1 family protein | TZ53_RS11230 | Not Available | Negative | 2465718 - 2466695 | 34762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
