Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | TZ53_RS23405 | Not Available | Positive | 206980 - 207564 | 22074.5 |
| fumarylacetoacetate hydrolase family protein | TZ53_RS23410 | Not Available | Negative | 207673 - 208512 | 30313.1 |
| heme-binding protein | TZ53_RS23415 | Not Available | Negative | 208640 - 209080 | 15214.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | TZ53_RS26380 | Not Available | Negative | 209077 - 209466 | 13856.0 |
| gntr family transcriptional regulator | TZ53_RS23420 | Not Available | Negative | 209658 - 210362 | 26468.6 |
| serine hydrolase domain-containing protein | TZ53_RS23425 | Not Available | Positive | 210704 - 211867 | 40968.0 |
| 2-hydroxymuconic semialdehyde dehydrogenase | TZ53_RS23430 | Not Available | Positive | 211913 - 213439 | 54186.5 |
| fumarylacetoacetate hydrolase family protein | TZ53_RS23435 | Not Available | Positive | 213439 - 214227 | 27617.4 |
| 2-keto-4-pentenoate hydratase | TZ53_RS23440 | Not Available | Positive | 214224 - 215027 | 28954.8 |
| 2-hydroxymuconate tautomerase | TZ53_RS23445 | Not Available | Positive | 215031 - 215264 | 8018.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
