Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 2355171 - 2355246 | Not Available |
| winged helix dna-binding protein | TZ53_RS10715 | Not Available | Negative | 2355332 - 2356336 | 36648.9 |
| d-amino-acid transaminase | TZ53_RS10720 | Not Available | Negative | 2356594 - 2357445 | 30031.4 |
| rna polymerase factor sigma-54 | TZ53_RS10725 | Not Available | Negative | 2357607 - 2359121 | 54254.7 |
| lps export abc transporter atp-binding protein | TZ53_RS10730 | Not Available | Negative | 2359170 - 2359955 | 28214.3 |
| Trna-leu | Not Available | Not Available | Positive | 2360261 - 2360347 | Not Available |
| hypothetical protein | TZ53_RS10740 | Not Available | Positive | 2360497 - 2360973 | 16419.0 |
| glutamate synthase large subunit | TZ53_RS10745 | Not Available | Negative | 2360983 - 2365521 | 165043.0 |
| duf2059 domain-containing protein | TZ53_RS10750 | Not Available | Negative | 2365608 - 2366318 | 25986.5 |
| nad(p)-dependent oxidoreductase | TZ53_RS10755 | Not Available | Negative | 2366318 - 2367769 | 52539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
