Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lycopene beta-cyclase crty | TZ53_RS10665 | Not Available | Positive | 2345599 - 2346759 | 43014.5 |
| phytoene desaturase | TZ53_RS10670 | Not Available | Positive | 2346773 - 2348254 | 54540.0 |
| tigr00730 family rossman fold protein | TZ53_RS10675 | Not Available | Positive | 2348267 - 2348848 | 20679.1 |
| phytoene/squalene synthase family protein | TZ53_RS10680 | Not Available | Positive | 2349203 - 2350156 | 35254.0 |
| ammonium transporter | TZ53_RS10685 | Not Available | Negative | 2350258 - 2351601 | 46060.9 |
| p-ii family nitrogen regulator | TZ53_RS10690 | Not Available | Negative | 2351613 - 2351951 | 12000.6 |
| duf924 family protein | TZ53_RS10695 | Not Available | Negative | 2352227 - 2352802 | 21617.2 |
| metalloprotease tldd | TZ53_RS10700 | Not Available | Negative | 2352858 - 2354300 | 50884.5 |
| zinc-finger domain-containing protein | TZ53_RS10705 | Not Available | Negative | 2354626 - 2354853 | 8011.56 |
| hypothetical protein | TZ53_RS27140 | Not Available | Negative | 2354909 - 2355082 | 6079.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
