Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | TZ53_RS10510 | Not Available | Negative | 2310800 - 2312581 | 63936.6 |
| s9 family peptidase | TZ53_RS10515 | Not Available | Positive | 2312675 - 2314750 | 77477.6 |
| acyl-coa thioesterase | TZ53_RS10520 | Not Available | Positive | 2314857 - 2315255 | 15056.7 |
| terc family protein | TZ53_RS10525 | Not Available | Negative | 2315341 - 2316324 | 36552.5 |
| abcb family abc transporter atp-binding protein/permease | TZ53_RS10530 | Not Available | Negative | 2316717 - 2318588 | 68495.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | TZ53_RS10535 | Not Available | Negative | 2318663 - 2319502 | 29660.6 |
| pyrimidine 5'-nucleotidase | TZ53_RS10540 | Not Available | Negative | 2319499 - 2320170 | 24982.7 |
| log family protein | TZ53_RS10545 | Not Available | Negative | 2320274 - 2321152 | 32927.4 |
| extensin family protein | TZ53_RS10550 | Not Available | Negative | 2321340 - 2322035 | 24742.8 |
| phosphoserine transaminase | TZ53_RS10555 | Not Available | Positive | 2322197 - 2323369 | 42007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
