Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | TZ53_RS10420 | Not Available | Negative | 2294096 - 2294758 | 23947.0 |
| trna 2-thiouridine(34) synthase mnma | TZ53_RS10425 | Not Available | Negative | 2294854 - 2295960 | 39243.0 |
| hypothetical protein | TZ53_RS10430 | Not Available | Positive | 2296085 - 2296381 | 10077.2 |
| duf1153 domain-containing protein | TZ53_RS10435 | Not Available | Positive | 2296490 - 2296789 | 11306.6 |
| glsb/yeaq/ymge family stress response membrane protein | TZ53_RS10440 | Not Available | Positive | 2296948 - 2297202 | 8754.27 |
| glsb/yeaq/ymge family stress response membrane protein | TZ53_RS10445 | Not Available | Negative | 2297262 - 2297510 | 8337.62 |
| efflux rnd transporter periplasmic adaptor subunit | TZ53_RS10450 | Not Available | Positive | 2297696 - 2298868 | 40448.4 |
| efflux rnd transporter permease subunit | TZ53_RS10455 | Not Available | Positive | 2298921 - 2302079 | 113207.0 |
| 8-amino-7-oxononanoate synthase | TZ53_RS10460 | Not Available | Positive | 2302255 - 2303379 | 39346.6 |
| dethiobiotin synthase | TZ53_RS10465 | Not Available | Positive | 2303376 - 2303993 | 21432.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
