Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna epoxyqueuosine(34) reductase queg | TZ53_RS10270 | Not Available | Negative | 2261181 - 2262203 | 36741.1 |
| abc transporter atp-binding protein | TZ53_RS10275 | Not Available | Positive | 2262247 - 2263203 | 34476.6 |
| abc transporter permease | TZ53_RS10280 | Not Available | Positive | 2263200 - 2264390 | 42658.8 |
| peptide-methionine (r)-s-oxide reductase msrb | TZ53_RS10285 | Not Available | Positive | 2264410 - 2264883 | 17263.7 |
| hypothetical protein | TZ53_RS10290 | Not Available | Negative | 2264841 - 2266691 | 66005.1 |
| gtra family protein | TZ53_RS10295 | Not Available | Negative | 2266669 - 2267088 | 14973.8 |
| nad(p)/fad-dependent oxidoreductase | TZ53_RS10300 | Not Available | Negative | 2267094 - 2268620 | 56885.1 |
| urca family protein | TZ53_RS10305 | Not Available | Negative | 2268763 - 2269104 | 11852.3 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | TZ53_RS10310 | Not Available | Negative | 2269287 - 2270876 | 55576.1 |
| heparinase ii/iii family protein | TZ53_RS10315 | Not Available | Negative | 2271028 - 2272794 | 62973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
