Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | TZ53_RS10120 | Not Available | Negative | 2231324 - 2232283 | 33645.6 |
| homoserine o-acetyltransferase | TZ53_RS10125 | Not Available | Positive | 2232341 - 2233492 | 41570.3 |
| methionine biosynthesis protein metw | TZ53_RS10130 | Not Available | Positive | 2233489 - 2234076 | 21866.1 |
| peptide chain release factor 3 | TZ53_RS10135 | Not Available | Negative | 2234265 - 2235830 | 57077.0 |
| aldose 1-epimerase family protein | TZ53_RS10140 | Not Available | Negative | 2235897 - 2236781 | 32581.8 |
| hypothetical protein | TZ53_RS10145 | Not Available | Positive | 2236942 - 2237466 | 18613.6 |
| duf4386 domain-containing protein | TZ53_RS10150 | Not Available | Negative | 2237414 - 2238124 | 24634.9 |
| phenylalanine--trna ligase subunit beta | TZ53_RS10155 | Not Available | Negative | 2238121 - 2240535 | 84892.5 |
| phenylalanine--trna ligase subunit alpha | TZ53_RS10160 | Not Available | Negative | 2240532 - 2241635 | 39743.5 |
| giy-yig nuclease family protein | TZ53_RS10165 | Not Available | Negative | 2241658 - 2242005 | 13427.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
