Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1-like repeat protein | TZ53_RS09975 | Not Available | Positive | 2207884 - 2208180 | 10348.3 |
| gnat family n-acetyltransferase | TZ53_RS09980 | Not Available | Negative | 2208369 - 2209514 | 42287.9 |
| glycerophosphodiester phosphodiesterase family protein | TZ53_RS09985 | Not Available | Negative | 2209507 - 2210232 | 26516.2 |
| rida family protein | TZ53_RS09990 | Not Available | Negative | 2210216 - 2210677 | 15755.2 |
| hypothetical protein | TZ53_RS09995 | Not Available | Negative | 2210674 - 2211330 | 24092.8 |
| duf3572 domain-containing protein | TZ53_RS10000 | Not Available | Negative | 2211327 - 2211623 | 10535.6 |
| response regulator | TZ53_RS10005 | Not Available | Positive | 2211702 - 2212064 | 13310.3 |
| hypothetical protein | TZ53_RS27755 | Not Available | Negative | 2212138 - 2212260 | 4306.18 |
| phox family protein | TZ53_RS10010 | Not Available | Positive | 2212263 - 2214137 | 66220.8 |
| 50s ribosomal protein l33 | TZ53_RS10015 | Not Available | Negative | 2214449 - 2214616 | 6414.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
