Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TZ53_RS23310 | Not Available | Negative | 186469 - 186741 | 9383.47 |
| copper homeostasis periplasmic binding protein copc | TZ53_RS23315 | Not Available | Positive | 186875 - 187252 | 13039.0 |
| copper homeostasis membrane protein copd | TZ53_RS23320 | Not Available | Positive | 187257 - 188201 | 32606.0 |
| transposase | TZ53_RS27870 | Not Available | Positive | 188238 - 188496 | 10198.2 |
| heavy metal translocating p-type atpase | TZ53_RS23325 | Not Available | Positive | 188596 - 190953 | 82014.6 |
| cu(i)-responsive transcriptional regulator | TZ53_RS23330 | Not Available | Positive | 190950 - 191348 | 14791.7 |
| response regulator transcription factor | TZ53_RS23335 | Not Available | Negative | 191375 - 192010 | 22804.4 |
| tn3 family transposase | TZ53_RS23340 | Not Available | Negative | 192550 - 195498 | 108750.0 |
| recombinase family protein | TZ53_RS23345 | Not Available | Positive | 195627 - 196220 | 21960.6 |
| hypothetical protein | TZ53_RS23350 | Not Available | Positive | 196217 - 197578 | 50275.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
