Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory sulfurtransferase fdhd | TZ53_RS09280 | Not Available | Positive | 2026552 - 2027301 | 26573.9 |
| duf4139 domain-containing protein | TZ53_RS09285 | Not Available | Negative | 2027368 - 2028933 | 56508.6 |
| duf4139 domain-containing protein | TZ53_RS09290 | Not Available | Negative | 2028942 - 2030432 | 54045.2 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | TZ53_RS09295 | Not Available | Negative | 2030655 - 2032049 | 48345.8 |
| nad(p) transhydrogenase subunit alpha | TZ53_RS09300 | Not Available | Negative | 2032051 - 2032341 | 10249.0 |
| nad(p) transhydrogenase subunit alpha | TZ53_RS09305 | Not Available | Negative | 2032338 - 2033477 | 39125.1 |
| fcd domain-containing protein | TZ53_RS09310 | Not Available | Positive | 2033701 - 2034396 | 25483.9 |
| tetr/acrr family transcriptional regulator | TZ53_RS09315 | Not Available | Positive | 2034487 - 2035071 | 21640.0 |
| helix-turn-helix domain-containing protein | TZ53_RS09320 | Not Available | Negative | 2035104 - 2035814 | 25920.9 |
| acyl-coa dehydrogenase family protein | TZ53_RS09325 | Not Available | Positive | 2035962 - 2037695 | 60768.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
