Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | TZ53_RS09230 | Not Available | Positive | 2016148 - 2017044 | 32353.6 |
| marr family winged helix-turn-helix transcriptional regulator | TZ53_RS09235 | Not Available | Negative | 2017104 - 2017553 | 16527.9 |
| homogentisate 1,2-dioxygenase | TZ53_RS09240 | Not Available | Positive | 2017632 - 2018972 | 49056.6 |
| fumarylacetoacetase | TZ53_RS09245 | Not Available | Positive | 2018969 - 2020270 | 46358.0 |
| maleylacetoacetate isomerase | TZ53_RS09250 | Not Available | Positive | 2020267 - 2020911 | 23589.1 |
| rieske (2fe-2s) protein | TZ53_RS09255 | Not Available | Positive | 2020908 - 2021273 | 12788.5 |
| formate dehydrogenase subunit gamma | TZ53_RS09260 | Not Available | Positive | 2021361 - 2021828 | 16922.3 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | TZ53_RS09265 | Not Available | Positive | 2021825 - 2023405 | 55316.2 |
| formate dehydrogenase subunit alpha | TZ53_RS09270 | Not Available | Positive | 2023402 - 2026248 | 103594.0 |
| formate dehydrogenase subunit delta | TZ53_RS09275 | Not Available | Positive | 2026259 - 2026495 | 8265.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
