Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | TZ53_RS09180 | Not Available | Negative | 2001819 - 2003156 | 49607.1 |
| hypothetical protein | TZ53_RS09185 | Not Available | Negative | 2003237 - 2003806 | 21275.2 |
| taud/tfda dioxygenase family protein | TZ53_RS09190 | Not Available | Positive | 2004129 - 2004992 | 32280.2 |
| abc transporter substrate-binding protein | TZ53_RS09195 | Not Available | Positive | 2005043 - 2006056 | 35657.9 |
| tonb-dependent receptor plug domain-containing protein | TZ53_RS09200 | Not Available | Positive | 2006088 - 2008598 | 88396.6 |
| efflux transporter outer membrane subunit | TZ53_RS09205 | Not Available | Negative | 2008618 - 2010036 | 49548.6 |
| efflux rnd transporter permease subunit | TZ53_RS09210 | Not Available | Negative | 2010048 - 2013245 | 114433.0 |
| efflux rnd transporter periplasmic adaptor subunit | TZ53_RS09215 | Not Available | Negative | 2013458 - 2014708 | 44241.9 |
| hypothetical protein | TZ53_RS09220 | Not Available | Negative | 2014713 - 2015090 | 13895.7 |
| tetr/acrr family transcriptional regulator | TZ53_RS09225 | Not Available | Negative | 2015439 - 2016047 | 21953.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
