Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TZ53_RS09130 | Not Available | Negative | 1989049 - 1989639 | 20587.6 |
| zinc-dependent alcohol dehydrogenase | TZ53_RS09135 | Not Available | Negative | 1989651 - 1990826 | 42579.5 |
| pas domain-containing protein | TZ53_RS25655 | Not Available | Positive | 1990962 - 1992473 | 54241.2 |
| peroxiredoxin-like family protein | TZ53_RS09145 | Not Available | Positive | 1992718 - 1993380 | 24022.8 |
| ferredoxin family protein | TZ53_RS09150 | Not Available | Negative | 1993518 - 1993910 | 14306.8 |
| fad-dependent oxidoreductase | TZ53_RS09155 | Not Available | Negative | 1993907 - 1995499 | 55552.0 |
| llm class flavin-dependent oxidoreductase | TZ53_RS09160 | Not Available | Negative | 1995496 - 1996839 | 49586.1 |
| rida family protein | TZ53_RS09165 | Not Available | Negative | 1996940 - 1997446 | 17134.7 |
| flavin monoamine oxidase family protein | TZ53_RS09170 | Not Available | Negative | 1997464 - 1998981 | 53579.9 |
| tonb-dependent receptor plug domain-containing protein | TZ53_RS09175 | Not Available | Negative | 1998986 - 2001559 | 91832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
