Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmob/dmpm family protein | TZ53_RS09080 | Not Available | Positive | 1976879 - 1977151 | 10039.9 |
| yhs domain-containing protein | TZ53_RS09085 | Not Available | Positive | 1977155 - 1978711 | 60269.8 |
| phenol hydroxylase subunit p4 | TZ53_RS09090 | Not Available | Positive | 1978763 - 1979122 | 12943.1 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | TZ53_RS09095 | Not Available | Positive | 1979122 - 1980180 | 38705.0 |
| sigma-54-dependent fis family transcriptional regulator | TZ53_RS09100 | Not Available | Positive | 1980250 - 1981917 | 61248.8 |
| sulfatase | TZ53_RS09105 | Not Available | Negative | 1981934 - 1983340 | 50959.6 |
| tonb-dependent receptor | TZ53_RS09110 | Not Available | Negative | 1983362 - 1985722 | 85040.5 |
| lysr family transcriptional regulator | TZ53_RS09115 | Not Available | Positive | 1985897 - 1986787 | 33433.4 |
| potassium channel family protein | TZ53_RS09120 | Not Available | Negative | 1987013 - 1988104 | 38919.4 |
| type 1 glutamine amidotransferase domain-containing protein | TZ53_RS09125 | Not Available | Negative | 1988199 - 1988945 | 27416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
