Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | TZ53_RS08980 | Not Available | Negative | 1956836 - 1957513 | 23706.2 |
| mfs transporter | TZ53_RS08985 | Not Available | Negative | 1957735 - 1958997 | 42739.2 |
| fatty acid desaturase family protein | TZ53_RS08990 | Not Available | Positive | 1959219 - 1960235 | 38840.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | TZ53_RS08995 | Not Available | Negative | 1960317 - 1961390 | 39801.9 |
| sigma-54-dependent fis family transcriptional regulator | TZ53_RS09000 | Not Available | Positive | 1961640 - 1963379 | 63005.2 |
| lysr substrate-binding domain-containing protein | TZ53_RS09005 | Not Available | Negative | 1963396 - 1964322 | 34127.2 |
| 2-hydroxymuconic semialdehyde dehydrogenase | TZ53_RS09010 | Not Available | Positive | 1964444 - 1965886 | 51328.0 |
| fumarylacetoacetate hydrolase family protein | TZ53_RS09015 | Not Available | Positive | 1965883 - 1966692 | 28174.9 |
| fumarylacetoacetate hydrolase family protein | TZ53_RS09020 | Not Available | Positive | 1966685 - 1967470 | 27827.6 |
| tautomerase family protein | TZ53_RS09025 | Not Available | Positive | 1967470 - 1967673 | 7444.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
