Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | TZ53_RS08930 | Not Available | Negative | 1945454 - 1946290 | 30372.8 |
| abc transporter permease | TZ53_RS08935 | Not Available | Positive | 1946581 - 1947399 | 29247.8 |
| abc transporter atp-binding protein | TZ53_RS08940 | Not Available | Positive | 1947402 - 1948202 | 29086.2 |
| cysteine dioxygenase | TZ53_RS08945 | Not Available | Positive | 1948199 - 1948825 | 23050.2 |
| rhodanese-like domain-containing protein | TZ53_RS08950 | Not Available | Positive | 1948822 - 1950084 | 46628.9 |
| llm class flavin-dependent oxidoreductase | TZ53_RS08955 | Not Available | Positive | 1950102 - 1951190 | 39412.3 |
| abc transporter substrate-binding protein | TZ53_RS08960 | Not Available | Positive | 1951192 - 1952151 | 33605.2 |
| tonb-dependent receptor plug domain-containing protein | TZ53_RS08965 | Not Available | Positive | 1952276 - 1954858 | 91908.4 |
| abc transporter substrate-binding protein | TZ53_RS08970 | Not Available | Positive | 1954848 - 1955792 | 32888.8 |
| class ii aldolase/adducin family protein | TZ53_RS08975 | Not Available | Positive | 1955875 - 1956666 | 29253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
