Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | TZ53_RS08840 | Not Available | Negative | 1923871 - 1924998 | 38611.4 |
| tolc family protein | TZ53_RS08845 | Not Available | Negative | 1924995 - 1926260 | 43669.8 |
| hypothetical protein | TZ53_RS08850 | Not Available | Negative | 1926321 - 1926659 | 11666.8 |
| hypothetical protein | TZ53_RS26720 | Not Available | Positive | 1927348 - 1927488 | 5137.04 |
| winged helix-turn-helix transcriptional regulator | TZ53_RS08860 | Not Available | Negative | 1927573 - 1927944 | 13849.8 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS08865 | Not Available | Positive | 1928031 - 1928765 | 25158.1 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS08870 | Not Available | Negative | 1928856 - 1929608 | 26116.9 |
| lysr family transcriptional regulator | TZ53_RS08875 | Not Available | Positive | 1929722 - 1930630 | 33085.1 |
| hypothetical protein | TZ53_RS26725 | Not Available | Positive | 1931144 - 1931281 | 5268.42 |
| abc transporter substrate-binding protein | TZ53_RS08880 | Not Available | Positive | 1931271 - 1932257 | 35368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
