Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | TZ53_RS08650 | Not Available | Positive | 1876110 - 1878227 | 78648.9 |
| glucose 1-dehydrogenase | TZ53_RS08655 | Not Available | Negative | 1878418 - 1879269 | 30425.8 |
| flavodoxin family protein | TZ53_RS08660 | Not Available | Positive | 1879366 - 1879974 | 21349.6 |
| cation diffusion facilitator family transporter | TZ53_RS08665 | Not Available | Positive | 1879981 - 1880937 | 34445.0 |
| mfs transporter | TZ53_RS08670 | Not Available | Positive | 1881058 - 1882347 | 46034.5 |
| sdr family oxidoreductase | TZ53_RS08675 | Not Available | Positive | 1882370 - 1883101 | 24880.9 |
| m3 family metallopeptidase | TZ53_RS08680 | Not Available | Negative | 1883108 - 1885144 | 73690.1 |
| nuclear transport factor 2 family protein | TZ53_RS08685 | Not Available | Negative | 1885229 - 1885618 | 14064.8 |
| transposase | TZ53_RS08690 | Not Available | Negative | 1885743 - 1886231 | 18897.2 |
| is256 family transposase | TZ53_RS08695 | Not Available | Positive | 1886329 - 1887552 | 45854.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
