Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | TZ53_RS08450 | Not Available | Negative | 1830282 - 1830626 | 12339.4 |
| phospholipase d-like domain-containing protein | TZ53_RS08455 | Not Available | Positive | 1830746 - 1831960 | 45612.3 |
| glycerol-3-phosphate dehydrogenase | TZ53_RS08460 | Not Available | Positive | 1832180 - 1833688 | 55801.6 |
| fggy family carbohydrate kinase | TZ53_RS08465 | Not Available | Positive | 1833685 - 1835151 | 51975.1 |
| diguanylate cyclase | TZ53_RS08470 | Not Available | Positive | 1835218 - 1836999 | 63573.1 |
| porin | TZ53_RS08475 | Not Available | Positive | 1837271 - 1838659 | 48058.3 |
| tonb-dependent receptor | TZ53_RS08480 | Not Available | Positive | 1838777 - 1841080 | 81773.2 |
| hypothetical protein | TZ53_RS08485 | Not Available | Negative | 1841077 - 1841283 | 7637.03 |
| quinoprotein relay system zinc metallohydrolase 1 | TZ53_RS08490 | Not Available | Negative | 1841349 - 1842296 | 33438.4 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | TZ53_RS08495 | Not Available | Negative | 1842293 - 1843066 | 27639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
