Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | TZ53_RS08400 | Not Available | Positive | 1820375 - 1820815 | 16092.4 |
| hypothetical protein | TZ53_RS08405 | Not Available | Negative | 1820999 - 1821178 | 6874.28 |
| catalase/peroxidase hpi | TZ53_RS08410 | Not Available | Negative | 1821293 - 1823515 | 80792.9 |
| aminoacyl-trna deacylase | TZ53_RS08415 | Not Available | Negative | 1823678 - 1824220 | 19862.6 |
| gnat family n-acetyltransferase | TZ53_RS08420 | Not Available | Negative | 1824321 - 1824854 | 18473.1 |
| response regulator | TZ53_RS08425 | Not Available | Negative | 1824955 - 1825731 | 28056.2 |
| methanol/ethanol family pqq-dependent dehydrogenase | TZ53_RS08430 | Not Available | Negative | 1825745 - 1827487 | 62356.6 |
| substrate-binding periplasmic protein | TZ53_RS08435 | Not Available | Negative | 1827630 - 1828487 | 29787.8 |
| cytochrome c-550 pedf | TZ53_RS08440 | Not Available | Negative | 1828493 - 1828918 | 15031.7 |
| pqq-dependent catabolism-associated beta-propeller protein | TZ53_RS08445 | Not Available | Positive | 1829087 - 1830058 | 34118.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
