Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | TZ53_RS07855 | Not Available | Positive | 1696959 - 1697594 | 21665.1 |
| family 43 glycosylhydrolase | TZ53_RS07860 | Not Available | Positive | 1697591 - 1698628 | 37247.9 |
| sgnh/gdsl hydrolase family protein | TZ53_RS07865 | Not Available | Negative | 1698654 - 1699832 | 41163.0 |
| cellulase family glycosylhydrolase | TZ53_RS07870 | Not Available | Negative | 1699863 - 1700945 | 41159.7 |
| aldose epimerase family protein | TZ53_RS07875 | Not Available | Negative | 1701010 - 1702146 | 40804.2 |
| smp-30/gluconolactonase/lre family protein | TZ53_RS07880 | Not Available | Negative | 1702166 - 1703017 | 30210.7 |
| ilvd/edd family dehydratase | TZ53_RS07885 | Not Available | Negative | 1703017 - 1704747 | 61734.9 |
| tonb-dependent receptor | TZ53_RS07890 | Not Available | Positive | 1705038 - 1707764 | 97519.7 |
| oxygen-independent coproporphyrinogen iii oxidase | TZ53_RS07895 | Not Available | Positive | 1708242 - 1709549 | 47578.0 |
| hypothetical protein | TZ53_RS07900 | Not Available | Positive | 1709539 - 1709751 | 7746.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
