Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | TZ53_RS07805 | Not Available | Negative | 1685626 - 1686372 | 27928.1 |
| cytochrome-c oxidase, cbb3-type subunit i | TZ53_RS07810 | Not Available | Negative | 1686466 - 1688124 | 61923.1 |
| crp/fnr family transcriptional regulator | TZ53_RS07815 | Not Available | Negative | 1688406 - 1689173 | 28042.9 |
| ompw/alkl family protein | TZ53_RS07820 | Not Available | Negative | 1689421 - 1690083 | 23171.0 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS07825 | Not Available | Negative | 1690419 - 1691195 | 26947.5 |
| gfo/idh/moca family protein | TZ53_RS07830 | Not Available | Negative | 1691371 - 1692342 | 35051.1 |
| fadr/gntr family transcriptional regulator | TZ53_RS07835 | Not Available | Negative | 1692353 - 1693081 | 26808.3 |
| family 43 glycosylhydrolase | TZ53_RS07840 | Not Available | Negative | 1693273 - 1694280 | 37989.8 |
| sodium:solute symporter family transporter | TZ53_RS07845 | Not Available | Positive | 1694513 - 1696093 | 56450.4 |
| 2-dehydro-3-deoxygalactonokinase | TZ53_RS07850 | Not Available | Positive | 1696090 - 1696962 | 29806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
