Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | TZ53_RS07750 | Not Available | Negative | 1672659 - 1675187 | 87941.8 |
| abc transporter atp-binding protein | TZ53_RS07755 | Not Available | Negative | 1675184 - 1675885 | 24286.3 |
| arylesterase | TZ53_RS07760 | Not Available | Positive | 1675902 - 1676603 | 24735.3 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | TZ53_RS07765 | Not Available | Negative | 1676640 - 1680242 | 127349.0 |
| cbb3-type cytochrome oxidase assembly protein ccos | TZ53_RS07770 | Not Available | Negative | 1680382 - 1680522 | 4789.86 |
| phosphatase pap2 family protein | TZ53_RS25640 | Not Available | Negative | 1680519 - 1682650 | 75337.8 |
| fixh family protein | TZ53_RS07785 | Not Available | Negative | 1682650 - 1683126 | 17191.8 |
| cytochrome c oxidase accessory protein ccog | TZ53_RS07790 | Not Available | Negative | 1683130 - 1684560 | 53195.5 |
| cytochrome-c oxidase, cbb3-type subunit iii | TZ53_RS07795 | Not Available | Negative | 1684564 - 1685469 | 32478.4 |
| cbb3-type cytochrome c oxidase subunit 3 | TZ53_RS07800 | Not Available | Negative | 1685462 - 1685629 | 6132.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
