Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose kinase | TZ53_RS07320 | Not Available | Negative | 1573799 - 1575040 | 44872.0 |
| acireductone synthase | TZ53_RS07325 | Not Available | Negative | 1575037 - 1575720 | 24621.8 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | TZ53_RS07330 | Not Available | Negative | 1575717 - 1576268 | 20141.8 |
| methylthioribulose 1-phosphate dehydratase | TZ53_RS07335 | Not Available | Negative | 1576265 - 1576891 | 21736.3 |
| hypothetical protein | TZ53_RS27120 | Not Available | Positive | 1577966 - 1578232 | 9630.31 |
| tonb-dependent receptor domain-containing protein | TZ53_RS07340 | Not Available | Positive | 1578223 - 1581042 | 99780.4 |
| phosphatase pap2 family protein | TZ53_RS26005 | Not Available | Negative | 1581047 - 1581394 | 13148.7 |
| is256 family transposase | TZ53_RS07350 | Not Available | Positive | 1581554 - 1582777 | 45854.2 |
| phosphatase pap2 family protein | TZ53_RS27495 | Not Available | Negative | 1582818 - 1583636 | 30592.9 |
| tonb-dependent receptor | TZ53_RS07365 | Not Available | Positive | 1583810 - 1586062 | 80559.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
