Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TZ53_RS07270 | Not Available | Negative | 1564678 - 1567077 | 84539.3 |
| had family hydrolase | TZ53_RS07275 | Not Available | Negative | 1567203 - 1567919 | 25162.4 |
| duf3618 domain-containing protein | TZ53_RS07280 | Not Available | Negative | 1568022 - 1568843 | 30307.2 |
| phage holin family protein | TZ53_RS07285 | Not Available | Negative | 1568840 - 1569286 | 15303.8 |
| hypothetical protein | TZ53_RS07290 | Not Available | Negative | 1569283 - 1569774 | 17205.0 |
| yihy/virulence factor brkb family protein | TZ53_RS07295 | Not Available | Negative | 1569917 - 1570900 | 35149.0 |
| hypothetical protein | TZ53_RS07300 | Not Available | Positive | 1570962 - 1571237 | 9781.83 |
| eama family transporter | TZ53_RS07305 | Not Available | Negative | 1571271 - 1572161 | 30602.5 |
| lrp/asnc family transcriptional regulator | TZ53_RS07310 | Not Available | Positive | 1572275 - 1572751 | 18023.0 |
| s-methyl-5-thioribose-1-phosphate isomerase | TZ53_RS07315 | Not Available | Negative | 1572738 - 1573802 | 37494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
