Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | TZ53_RS07125 | Not Available | Negative | 1534969 - 1535229 | 9868.95 |
| hypothetical protein | TZ53_RS07130 | Not Available | Positive | 1535340 - 1535561 | 8716.01 |
| rap1a/tai family immunity protein | TZ53_RS07135 | Not Available | Negative | 1535801 - 1536178 | 13825.5 |
| lysr family transcriptional regulator | TZ53_RS07140 | Not Available | Negative | 1536249 - 1537163 | 33502.3 |
| nuclear transport factor 2 family protein | TZ53_RS07145 | Not Available | Positive | 1537304 - 1537633 | 12192.5 |
| sdr family oxidoreductase | TZ53_RS07150 | Not Available | Positive | 1537695 - 1538474 | 27066.6 |
| vwa domain-containing protein | TZ53_RS07155 | Not Available | Negative | 1538514 - 1540046 | 55213.2 |
| duf4153 domain-containing protein | TZ53_RS07160 | Not Available | Positive | 1540301 - 1541896 | 58062.3 |
| response regulator transcription factor | TZ53_RS07165 | Not Available | Positive | 1541908 - 1542618 | 26097.4 |
| sensor histidine kinase | TZ53_RS07170 | Not Available | Positive | 1542615 - 1544189 | 56880.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
