Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | TZ53_RS27475 | Not Available | Negative | 1529681 - 1530385 | 26044.2 |
| tonb-dependent receptor domain-containing protein | TZ53_RS27480 | Not Available | Negative | 1530313 - 1530780 | 17027.3 |
| phosphatase pap2 family protein | TZ53_RS26690 | Not Available | Negative | 1530771 - 1530923 | 5777.1 |
| duf6880 family protein | TZ53_RS27485 | Not Available | Positive | 1531289 - 1532245 | 34311.1 |
| phosphatase pap2 family protein | TZ53_RS27490 | Not Available | Negative | 1532277 - 1532474 | 6870.24 |
| type ii toxin-antitoxin system pard family antitoxin | TZ53_RS07100 | Not Available | Negative | 1532474 - 1532743 | 9504.1 |
| endoribonuclease mazf | TZ53_RS07105 | Not Available | Negative | 1533018 - 1533350 | 12083.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | TZ53_RS07110 | Not Available | Negative | 1533350 - 1533592 | 8799.59 |
| type ii toxin-antitoxin system pard family antitoxin | TZ53_RS07115 | Not Available | Positive | 1534294 - 1534551 | 9360.98 |
| type ii toxin-antitoxin system rele/pare family toxin | TZ53_RS07120 | Not Available | Positive | 1534557 - 1534871 | 12735.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
