Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea amidolyase associated protein uaap2 | TZ53_RS06905 | Not Available | Negative | 1480453 - 1481088 | 22696.9 |
| urea amidolyase associated protein uaap1 | TZ53_RS06910 | Not Available | Negative | 1481104 - 1481925 | 29270.0 |
| copg family ribbon-helix-helix protein | TZ53_RS06915 | Not Available | Negative | 1481922 - 1482398 | 17636.4 |
| abc transporter atp-binding protein | TZ53_RS06920 | Not Available | Negative | 1482391 - 1483197 | 29393.5 |
| abc transporter permease | TZ53_RS06925 | Not Available | Negative | 1483194 - 1484009 | 29322.3 |
| putative urea abc transporter substrate-binding protein | TZ53_RS06930 | Not Available | Negative | 1484048 - 1485130 | 38039.6 |
| hypothetical protein | TZ53_RS26675 | Not Available | Positive | 1485682 - 1485849 | 5660.69 |
| tonb-dependent receptor | TZ53_RS06935 | Not Available | Positive | 1485910 - 1488315 | 87583.9 |
| mbl fold metallo-hydrolase | TZ53_RS06940 | Not Available | Positive | 1488475 - 1489356 | 31967.0 |
| tonb-dependent receptor domain-containing protein | TZ53_RS06945 | Not Available | Positive | 1489807 - 1492911 | 111764.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
