Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | TZ53_RS23015 | Not Available | Positive | 131804 - 133048 | 45981.8 |
| site-specific integrase | TZ53_RS23020 | Not Available | Positive | 133045 - 134208 | 43549.5 |
| efflux transporter outer membrane subunit | TZ53_RS23025 | Not Available | Negative | 134709 - 136199 | 52599.2 |
| mdr family mfs transporter | TZ53_RS23030 | Not Available | Negative | 136207 - 137763 | 55607.3 |
| hlyd family secretion protein | TZ53_RS23035 | Not Available | Negative | 137770 - 138909 | 40610.4 |
| marr family winged helix-turn-helix transcriptional regulator | TZ53_RS23040 | Not Available | Positive | 139030 - 139494 | 17187.5 |
| abc1 kinase family protein | TZ53_RS23045 | Not Available | Positive | 139487 - 141082 | 57705.1 |
| hotdog fold thioesterase | TZ53_RS23050 | Not Available | Negative | 141115 - 141528 | 14833.1 |
| alpha/beta fold hydrolase | TZ53_RS23055 | Not Available | Negative | 141525 - 142409 | 31082.8 |
| mbl fold metallo-hydrolase | TZ53_RS23060 | Not Available | Positive | 143197 - 144087 | 33171.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
