Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinate a,c-diamide synthase | TZ53_RS06755 | Not Available | Positive | 1444539 - 1445858 | 46064.1 |
| precorrin-6a synthase (deacetylating) | TZ53_RS06760 | Not Available | Positive | 1445855 - 1446610 | 27644.8 |
| hypothetical protein | TZ53_RS06765 | Not Available | Negative | 1446616 - 1446819 | 7360.86 |
| spovr family protein | TZ53_RS06770 | Not Available | Negative | 1446984 - 1448525 | 59472.7 |
| yeah/yhbh family protein | TZ53_RS06775 | Not Available | Negative | 1448539 - 1449846 | 49643.2 |
| prka family serine protein kinase | TZ53_RS06780 | Not Available | Negative | 1449866 - 1451746 | 71849.6 |
| atp-binding protein | TZ53_RS06785 | Not Available | Negative | 1452244 - 1453614 | 49378.1 |
| response regulator | TZ53_RS06790 | Not Available | Negative | 1453633 - 1454361 | 26908.5 |
| efflux rnd transporter periplasmic adaptor subunit | TZ53_RS06795 | Not Available | Positive | 1454606 - 1455736 | 39496.5 |
| efflux rnd transporter permease subunit | TZ53_RS06800 | Not Available | Positive | 1455749 - 1458892 | 112484.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
