Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | TZ53_RS06650 | Not Available | Positive | 1419371 - 1421800 | 86725.2 |
| formylglycine-generating enzyme family protein | TZ53_RS06655 | Not Available | Positive | 1421926 - 1422849 | 34478.2 |
| hypothetical protein | TZ53_RS06660 | Not Available | Positive | 1422874 - 1423116 | 9369.51 |
| efflux transporter outer membrane subunit | TZ53_RS06665 | Not Available | Negative | 1423183 - 1424577 | 48920.6 |
| efflux rnd transporter periplasmic adaptor subunit | TZ53_RS06670 | Not Available | Negative | 1424567 - 1425760 | 40778.3 |
| efflux rnd transporter permease subunit | TZ53_RS06675 | Not Available | Negative | 1425753 - 1428947 | 112504.0 |
| lysr substrate-binding domain-containing protein | TZ53_RS06685 | Not Available | Positive | 1429343 - 1430236 | 33049.2 |
| hoxn/hupn/nixa family nickel/cobalt transporter | TZ53_RS06690 | Not Available | Positive | 1430712 - 1431803 | 38327.3 |
| cobalamin biosynthesis protein cobw | TZ53_RS06695 | Not Available | Positive | 1431800 - 1432840 | 37095.4 |
| cobaltochelatase subunit cobn | TZ53_RS06700 | Not Available | Positive | 1432840 - 1436619 | 135834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
