Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS06500 | Not Available | Positive | 1363602 - 1364408 | 28321.1 |
| tigr02281 family clan aa aspartic protease | TZ53_RS06505 | Not Available | Negative | 1364445 - 1365134 | 24605.5 |
| autotransporter domain-containing protein | TZ53_RS06510 | Not Available | Positive | 1365360 - 1368989 | 123353.0 |
| exodeoxyribonuclease iii | TZ53_RS06515 | Not Available | Positive | 1369154 - 1369957 | 30355.9 |
| gfa family protein | TZ53_RS06520 | Not Available | Positive | 1369954 - 1370424 | 16446.5 |
| sulfatase | TZ53_RS06525 | Not Available | Negative | 1370539 - 1372089 | 58612.8 |
| sulfatase | TZ53_RS06530 | Not Available | Negative | 1372089 - 1373507 | 51190.8 |
| tonb-dependent receptor | TZ53_RS06535 | Not Available | Negative | 1373514 - 1375958 | 86301.2 |
| alpha,alpha-trehalase tref | TZ53_RS06540 | Not Available | Positive | 1376218 - 1377798 | 58481.6 |
| duf2934 domain-containing protein | TZ53_RS06545 | Not Available | Positive | 1377926 - 1378138 | 7624.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
