Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | TZ53_RS25595 | Not Available | Negative | 1344964 - 1345965 | 37671.0 |
| cupin domain-containing protein | TZ53_RS25600 | Not Available | Negative | 1346077 - 1346520 | 16095.1 |
| 2-oxo acid dehydrogenase subunit e2 | TZ53_RS06420 | Not Available | Negative | 1346598 - 1347275 | 23682.9 |
| lipoyl domain-containing protein | TZ53_RS06425 | Not Available | Negative | 1347272 - 1347514 | 8302.87 |
| alpha-ketoacid dehydrogenase subunit beta | TZ53_RS06430 | Not Available | Negative | 1347501 - 1348559 | 37503.3 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | TZ53_RS06435 | Not Available | Negative | 1348556 - 1349557 | 35568.3 |
| tonb-dependent receptor | TZ53_RS06440 | Not Available | Negative | 1349568 - 1351703 | 76808.1 |
| phosphatase pap2 family protein | TZ53_RS25605 | Not Available | Positive | 1351848 - 1352039 | 7383.84 |
| hypothetical protein | TZ53_RS26670 | Not Available | Positive | 1352123 - 1352431 | 11280.5 |
| phage integrase central domain-containing protein | TZ53_RS06450 | Not Available | Negative | 1352724 - 1352990 | 10648.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
