Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | TZ53_RS25585 | Not Available | Negative | 1335308 - 1335769 | 17181.1 |
| tonb-dependent receptor | TZ53_RS06365 | Not Available | Negative | 1335960 - 1338332 | 86000.9 |
| hypothetical protein | TZ53_RS27740 | Not Available | Negative | 1338463 - 1338594 | 4755.54 |
| duf2513 domain-containing protein | TZ53_RS06375 | Not Available | Positive | 1338752 - 1339123 | 14113.3 |
| hypothetical protein | TZ53_RS06380 | Not Available | Positive | 1339280 - 1339666 | 13570.2 |
| hypothetical protein | TZ53_RS25590 | Not Available | Positive | 1339822 - 1340250 | 14482.4 |
| hypothetical protein | TZ53_RS26665 | Not Available | Positive | 1340481 - 1340648 | 6179.79 |
| lysr family transcriptional regulator | TZ53_RS06395 | Not Available | Negative | 1341324 - 1342214 | 31857.5 |
| sdr family oxidoreductase | TZ53_RS06400 | Not Available | Positive | 1342319 - 1343191 | 31706.4 |
| amp-binding protein | TZ53_RS06405 | Not Available | Negative | 1343295 - 1344923 | 58725.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
