Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS06175 | Not Available | Positive | 1296082 - 1296915 | 29240.9 |
| pepsy-associated tm helix domain-containing protein | TZ53_RS06180 | Not Available | Negative | 1297206 - 1298390 | 43343.2 |
| tonb-dependent siderophore receptor | TZ53_RS06185 | Not Available | Negative | 1298394 - 1300292 | 69310.4 |
| duf1905 domain-containing protein | TZ53_RS06190 | Not Available | Positive | 1300754 - 1301167 | 14983.8 |
| hypothetical protein | TZ53_RS26655 | Not Available | Positive | 1301355 - 1301660 | 10981.7 |
| pepsy-associated tm helix domain-containing protein | TZ53_RS06200 | Not Available | Negative | 1301690 - 1303282 | 57060.5 |
| hypothetical protein | TZ53_RS06205 | Not Available | Negative | 1303279 - 1303584 | 10647.5 |
| tonb-dependent siderophore receptor | TZ53_RS06210 | Not Available | Positive | 1303723 - 1305774 | 74494.3 |
| marr family winged helix-turn-helix transcriptional regulator | TZ53_RS06215 | Not Available | Positive | 1306278 - 1306709 | 16040.2 |
| 2fe-2s iron-sulfur cluster-binding protein | TZ53_RS06220 | Not Available | Positive | 1306783 - 1307289 | 17476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
