Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | TZ53_RS06130 | Not Available | Negative | 1289252 - 1289884 | 24257.2 |
| type ii toxin-antitoxin system pard family antitoxin | TZ53_RS06135 | Not Available | Positive | 1290012 - 1290239 | 8334.82 |
| type ii toxin-antitoxin system rele/pare family toxin | TZ53_RS06140 | Not Available | Positive | 1290239 - 1290565 | 12080.4 |
| carboxymuconolactone decarboxylase family protein | TZ53_RS06145 | Not Available | Negative | 1290898 - 1291380 | 17708.5 |
| sigma-70 family rna polymerase sigma factor | TZ53_RS27835 | Not Available | Positive | 1291498 - 1292175 | 25934.8 |
| hypothetical protein | TZ53_RS27840 | Not Available | Positive | 1292198 - 1292443 | 8839.89 |
| arac family transcriptional regulator | TZ53_RS06155 | Not Available | Negative | 1292621 - 1293520 | 32583.5 |
| nuclear transport factor 2 family protein | TZ53_RS06160 | Not Available | Positive | 1293653 - 1294087 | 16655.5 |
| zinc-binding alcohol dehydrogenase family protein | TZ53_RS06165 | Not Available | Positive | 1294097 - 1295140 | 36850.8 |
| alpha/beta fold hydrolase | TZ53_RS06170 | Not Available | Positive | 1295173 - 1296015 | 30669.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
