Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | TZ53_RS05985 | Not Available | Positive | 1263868 - 1264467 | 22386.3 |
| conjugal transfer protein traf | TZ53_RS05990 | Not Available | Positive | 1264527 - 1265348 | 30381.0 |
| type ii toxin-antitoxin system vapc family toxin | TZ53_RS05995 | Not Available | Negative | 1265402 - 1265800 | 13789.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | TZ53_RS06000 | Not Available | Negative | 1265797 - 1266048 | 9060.06 |
| sdr family oxidoreductase | TZ53_RS06005 | Not Available | Negative | 1266495 - 1267307 | 29261.1 |
| arac family transcriptional regulator | TZ53_RS06010 | Not Available | Positive | 1267497 - 1268393 | 32129.2 |
| hypothetical protein | TZ53_RS06015 | Not Available | Negative | 1268635 - 1268919 | 10781.6 |
| duf2188 domain-containing protein | TZ53_RS06020 | Not Available | Negative | 1268973 - 1269197 | 8015.19 |
| helix-turn-helix domain-containing protein | TZ53_RS06025 | Not Available | Positive | 1269344 - 1269643 | 11345.4 |
| imma/irre family metallo-endopeptidase | TZ53_RS06030 | Not Available | Positive | 1269640 - 1270506 | 32543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
