Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | TZ53_RS05935 | Not Available | Positive | 1254913 - 1255188 | 9459.38 |
| rna polymerase sigma factor | TZ53_RS05940 | Not Available | Positive | 1255564 - 1256100 | 20350.6 |
| fecr family protein | TZ53_RS05945 | Not Available | Positive | 1256097 - 1257119 | 37443.9 |
| hypothetical protein | TZ53_RS05950 | Not Available | Negative | 1257218 - 1257544 | 12205.9 |
| hypothetical protein | TZ53_RS05955 | Not Available | Positive | 1257610 - 1257918 | 11812.1 |
| phosphatase pap2 family protein | TZ53_RS05960 | Not Available | Positive | 1258402 - 1259184 | 26286.4 |
| phosphatase pap2 family protein | TZ53_RS05965 | Not Available | Positive | 1259220 - 1259681 | 16450.6 |
| hypothetical protein | TZ53_RS05970 | Not Available | Positive | 1260024 - 1261940 | 67046.2 |
| conjugal transfer protein tran | TZ53_RS05975 | Not Available | Positive | 1261937 - 1263028 | 38049.1 |
| trbc family f-type conjugative pilus assembly protein | TZ53_RS05980 | Not Available | Positive | 1263042 - 1263896 | 30238.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
