Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is256 family transposase | TZ53_RS05885 | Not Available | Positive | 1243429 - 1244640 | 45105.6 |
| lytic transglycosylase domain-containing protein | TZ53_RS05890 | Not Available | Negative | 1244777 - 1245349 | 21636.3 |
| mobf family relaxase | TZ53_RS05895 | Not Available | Negative | 1245346 - 1248276 | 108910.0 |
| type iv secretion system dna-binding domain-containing protein | TZ53_RS05900 | Not Available | Negative | 1248273 - 1250327 | 75341.6 |
| toxin-antitoxin system hicb family antitoxin | TZ53_RS05905 | Not Available | Negative | 1250324 - 1250650 | 11908.4 |
| hypothetical protein | TZ53_RS05910 | Not Available | Positive | 1251111 - 1251455 | 12077.5 |
| duf2493 domain-containing protein | TZ53_RS05915 | Not Available | Negative | 1251537 - 1252550 | 37619.1 |
| helix-turn-helix transcriptional regulator | TZ53_RS05920 | Not Available | Positive | 1252730 - 1253224 | 18504.6 |
| acyl-homoserine-lactone synthase | TZ53_RS05925 | Not Available | Positive | 1253300 - 1253935 | 23540.4 |
| phytanoyl-coa dioxygenase family protein | TZ53_RS05930 | Not Available | Positive | 1253932 - 1254807 | 32271.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
