Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase catalytic domain-containing protein | TZ53_RS05785 | Not Available | Negative | 1226370 - 1227383 | 34877.3 |
| 2fe-2s iron-sulfur cluster-binding protein | TZ53_RS05790 | Not Available | Positive | 1227598 - 1227918 | 11234.4 |
| sugar phosphate isomerase/epimerase family protein | TZ53_RS05795 | Not Available | Negative | 1227947 - 1228744 | 27210.1 |
| caib/baif coa transferase family protein | TZ53_RS05800 | Not Available | Negative | 1228756 - 1229847 | 38109.8 |
| amp-binding protein | TZ53_RS05805 | Not Available | Negative | 1229851 - 1231332 | 53460.9 |
| hypothetical protein | TZ53_RS05810 | Not Available | Negative | 1231329 - 1232429 | 38877.8 |
| hypothetical protein | TZ53_RS05815 | Not Available | Negative | 1232347 - 1232904 | 20193.1 |
| smp-30/gluconolactonase/lre family protein | TZ53_RS05820 | Not Available | Negative | 1232961 - 1233695 | 26230.2 |
| smp-30/gluconolactonase/lre family protein | TZ53_RS05825 | Not Available | Negative | 1233706 - 1234473 | 27772.8 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS05830 | Not Available | Negative | 1234585 - 1235511 | 32738.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
