Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | TZ53_RS05435 | Not Available | Negative | 1147879 - 1148781 | 32499.4 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS05440 | Not Available | Positive | 1149021 - 1149923 | 31081.1 |
| glutathione s-transferase family protein | TZ53_RS25570 | Not Available | Positive | 1149920 - 1150570 | 23373.4 |
| 2-oxo acid dehydrogenase subunit e2 | TZ53_RS05450 | Not Available | Negative | 1150630 - 1151373 | 26089.5 |
| duf4286 family protein | TZ53_RS05455 | Not Available | Negative | 1151370 - 1151687 | 11967.2 |
| biotin/lipoyl-containing protein | TZ53_RS05460 | Not Available | Negative | 1151693 - 1151923 | 8038.56 |
| alpha-ketoacid dehydrogenase subunit beta | TZ53_RS05465 | Not Available | Negative | 1151944 - 1152969 | 35949.5 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | TZ53_RS05470 | Not Available | Negative | 1152969 - 1153949 | 35438.1 |
| crotonase/enoyl-coa hydratase family protein | TZ53_RS05475 | Not Available | Negative | 1154071 - 1154976 | 33292.6 |
| paai family thioesterase | TZ53_RS05480 | Not Available | Positive | 1155127 - 1155603 | 17267.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
