Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase family protein | TZ53_RS05135 | Not Available | Negative | 1080710 - 1081456 | 27147.5 |
| aldehyde dehydrogenase | TZ53_RS05140 | Not Available | Negative | 1081478 - 1082968 | 53634.0 |
| smp-30/gluconolactonase/lre family protein | TZ53_RS05145 | Not Available | Positive | 1083200 - 1084087 | 31718.0 |
| gmc family oxidoreductase | TZ53_RS05150 | Not Available | Positive | 1084205 - 1085860 | 60069.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | TZ53_RS05155 | Not Available | Positive | 1085857 - 1087035 | 40796.5 |
| lysr substrate-binding domain-containing protein | TZ53_RS05160 | Not Available | Negative | 1087526 - 1088464 | 34837.4 |
| fad-dependent tricarballylate dehydrogenase tcua | TZ53_RS05165 | Not Available | Positive | 1088672 - 1090201 | 55459.8 |
| mmge/prpd family protein | TZ53_RS05170 | Not Available | Positive | 1090226 - 1091632 | 50465.8 |
| mmge/prpd family protein | TZ53_RS05175 | Not Available | Positive | 1091634 - 1093055 | 50165.6 |
| aldehyde dehydrogenase family protein | TZ53_RS05180 | Not Available | Positive | 1093052 - 1094524 | 52183.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
