Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | TZ53_RS05085 | Not Available | Positive | 1068169 - 1069146 | 35468.4 |
| carboxymuconolactone decarboxylase family protein | TZ53_RS05090 | Not Available | Negative | 1069329 - 1069715 | 14430.2 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS05095 | Not Available | Positive | 1069839 - 1070588 | 25608.6 |
| thiamine pyrophosphate-binding protein | TZ53_RS05100 | Not Available | Negative | 1070728 - 1072335 | 55494.6 |
| taud/tfda family dioxygenase | TZ53_RS05105 | Not Available | Negative | 1072378 - 1073274 | 34246.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | TZ53_RS05110 | Not Available | Negative | 1073382 - 1074806 | 50198.5 |
| hypothetical protein | TZ53_RS05115 | Not Available | Negative | 1074852 - 1075328 | 18377.8 |
| nad(p)/fad-dependent oxidoreductase | TZ53_RS05120 | Not Available | Positive | 1075521 - 1077389 | 68078.9 |
| mfs transporter | TZ53_RS05125 | Not Available | Positive | 1077386 - 1078837 | 50712.8 |
| thiamine pyrophosphate-binding protein | TZ53_RS05130 | Not Available | Negative | 1079050 - 1080717 | 58932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
