Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2189 domain-containing protein | TZ53_RS04980 | Not Available | Negative | 1043881 - 1044678 | 28517.4 |
| tonb-dependent receptor domain-containing protein | TZ53_RS04990 | Not Available | Positive | 1045014 - 1047929 | 103652.0 |
| abc transporter substrate-binding protein | TZ53_RS04995 | Not Available | Positive | 1047951 - 1048985 | 36297.7 |
| n-acyl homoserine lactonase family protein | TZ53_RS05000 | Not Available | Negative | 1049010 - 1049801 | 29343.8 |
| nad(p)-dependent oxidoreductase | TZ53_RS05005 | Not Available | Negative | 1049833 - 1050714 | 30094.7 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS05010 | Not Available | Negative | 1050749 - 1051546 | 28672.6 |
| mmge/prpd family protein | TZ53_RS05015 | Not Available | Negative | 1051539 - 1052885 | 48087.0 |
| carboxymuconolactone decarboxylase family protein | TZ53_RS05020 | Not Available | Negative | 1053108 - 1053653 | 20282.2 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS05025 | Not Available | Positive | 1053950 - 1054747 | 26896.4 |
| mfs transporter | TZ53_RS05030 | Not Available | Positive | 1054838 - 1056211 | 48010.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
