Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | TZ53_RS04930 | Not Available | Negative | 1032390 - 1033088 | 26661.1 |
| duf2147 domain-containing protein | TZ53_RS04935 | Not Available | Positive | 1033148 - 1033549 | 14401.6 |
| class i sam-dependent methyltransferase | TZ53_RS04940 | Not Available | Negative | 1033597 - 1034454 | 31768.2 |
| hd-gyp domain-containing protein | TZ53_RS04945 | Not Available | Negative | 1034517 - 1035800 | 47826.4 |
| efflux transporter outer membrane subunit | TZ53_RS04950 | Not Available | Negative | 1036091 - 1037530 | 50300.3 |
| dha2 family efflux mfs transporter permease subunit | TZ53_RS04955 | Not Available | Negative | 1037541 - 1039097 | 54757.1 |
| hlyd family secretion protein | TZ53_RS04960 | Not Available | Negative | 1039094 - 1040245 | 40742.4 |
| marr family winged helix-turn-helix transcriptional regulator | TZ53_RS04965 | Not Available | Positive | 1040341 - 1040772 | 15736.2 |
| dihydroxy-acid dehydratase | TZ53_RS04970 | Not Available | Negative | 1041020 - 1042873 | 65556.4 |
| lysr family transcriptional regulator | TZ53_RS04975 | Not Available | Positive | 1042970 - 1043875 | 32905.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
