Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | TZ53_RS22820 | Not Available | Negative | 87381 - 88295 | 33789.9 |
| tyrosine-type recombinase/integrase | TZ53_RS22825 | Not Available | Negative | 88289 - 89836 | 57375.5 |
| hypothetical protein | TZ53_RS22830 | Not Available | Negative | 89982 - 90209 | 8324.15 |
| tyrosine-type recombinase/integrase | TZ53_RS22835 | Not Available | Negative | 90393 - 91397 | 37715.4 |
| tyrosine-type recombinase/integrase | TZ53_RS22840 | Not Available | Negative | 91394 - 92749 | 52123.1 |
| site-specific integrase | TZ53_RS22845 | Not Available | Negative | 92746 - 93978 | 46488.3 |
| strawberry notch-like ntp hydrolase domain-containing protein | TZ53_RS22850 | Not Available | Negative | 94069 - 96264 | 78248.8 |
| toprim domain-containing protein | TZ53_RS22855 | Not Available | Negative | 96331 - 97197 | 31197.1 |
| single-stranded dna-binding protein | TZ53_RS22860 | Not Available | Negative | 97259 - 97585 | 12268.5 |
| replication initiation protein | TZ53_RS22865 | Not Available | Positive | 98250 - 99338 | 40240.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
